getKeggUpkbRelations: Gets the genes and proteins that are referenced to each other

In frankkramer-lab/Multipath: Pathway Data Integration With Influencing Knowledge Using Multi-Layered Graphs

Gets the genes and proteins that are referenced to each other

Description

Gets the genes and proteins that are referenced to each other

Usage

getKeggUpkbRelations(g, biopax)

Arguments

g	A Mully graph object
biopax	A biopax object

Value

Dataframe of related proteins and genes

Author(s)

Mohammad Al Maaz

Examples

## Not run:  
biopax=readBiopax("wnt.owl") 
pathwayID=listPathways(biopax)$id[1]
g=Multipath::pathway2Mully(biopax,pathwayID) #This is a mully graph that contains a protein layer
g=addGenesLayer(g,biopax)
UPKB2KEGG = getUPKBtoKEGG(g, biopax)

## End(Not run)

frankkramer-lab/Multipath documentation built on June 12, 2025, noon