multipath: Generate Multipath Graph from General Data

In frankkramer-lab/Multipath: Pathway Data Integration With Influencing Knowledge Using Multi-Layered Graphs

Generate Multipath Graph from General Data

Description

Generate Multipath Graph from General Data

Usage

multipath(
  name = "Multipath",
  proteinList = NA,
  data = NA,
  drugList = NA,
  biopax = NA
)

Arguments

name	The name of the graph to be generated
proteinList	The list of proteins of which the interactions should be retrieved
data	The dataframe containing the parsed information of DrugBank. This argument can be obtained using the function loadDBXML(DrugBankFile)
drugList	The list of DrugBank Ids of the drugs. This argument can be either a string (one drug) or a list of strings (multiple drugs)
biopax	A biopax file

Value

A mully graph with the added data

frankkramer-lab/Multipath documentation built on June 12, 2025, noon