Description Usage Arguments Value Examples
Create a single-cell mRNA-seq experiment
1 | create_sce_rnaseq(path, norm_method = "log_normalize")
|
path |
path to output matrices or R matrix object. |
norm_method |
Normalization method for |
SingleCellExperiment
containing a sparseMatrix
of counts
1 2 3 4 5 | create_sce_rnaseq(scrunchy_data("mrna/"))
# using pre-loaded matrix
mat <- SingleCellExperiment::counts(fsce_small[["rnaseq"]])
create_sce_rnaseq(mat)
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