Description Usage Arguments Tidying See Also Examples
Tidy reducedDims data
1 |
fsce |
An object of class |
dimnames |
vector of dimnames to retrieve. If |
dims |
vector of dimensions to retrieve |
This is a data tidier for a FunctionalSingleCellExperiment
. Returns data
from SingleCellExperiment
in a tidy format, where variables are columns
and observations are rows.
If the FunctionalSingleCellExperiment
contains more than one
SingleCellExperiment
, data from each sce
are joined using the cell_id
variable name, and a new experiment
column contains the name of the source
sce
.
Other tidiers: tidy_all
,
tidy_coldata
, tidy_counts
,
tidy_logcounts
1 2 3 | tidy_dims(fsce_small)
tidy_dims(fsce_small, dimnames = c("UMAP"))
|
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