plot_heatmap: Heatmap of signals
In hesselberthlab/scrunchy: Single Cell Reconstruction of Functional Heterogeneity
Description
Usage
Arguments
See Also
Examples
Description
Plots logcounts or counts from an experiment for specified rows.
Usage
1
plot_heatmap(mtx, rows = NULL, columns = NULL, ...)
Arguments
mtx
Matrix of logcounts or counts
rows
names of rows to select for heatmap
columns
names of columns to select for heatmap
...
params for ComplexHeatmap::Heatmap
See Also
Other plot fuctions: add_stats,
plot_pcvariance
Examples
1
2
3
4
mtx <- SingleCellExperiment::logcounts(fsce_small[["haircut"]])
rows <- paste("Uracil", 1:61, sep = "_")
plot_heatmap(mtx, rows, name = "Uracil")
hesselberthlab/scrunchy documentation built on Nov. 11, 2019, 2:29 p.m.
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Description Usage Arguments See Also Examples
Description
Plots logcounts or counts from an experiment for specified rows.
Usage
1 | plot_heatmap(mtx, rows = NULL, columns = NULL, ...)
|
Arguments
mtx |
Matrix of |
rows |
names of rows to select for heatmap |
columns |
names of columns to select for heatmap |
... |
params for |
See Also
Other plot fuctions: add_stats,
plot_pcvariance
Examples
1 2 3 4 | mtx <- SingleCellExperiment::logcounts(fsce_small[["haircut"]])
rows <- paste("Uracil", 1:61, sep = "_")
plot_heatmap(mtx, rows, name = "Uracil")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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