complexExpHeatmap: 'complexExpHeatmap' Heatmap of the complex subunits...
In hyginn/BCB420.2019.ESA: Exploratory Systems Analysis Tools
Description
Usage
Arguments
Value
Examples
Description
complexExpHeatmap Generate a Heatmap of complex subunits expression profile
for visualization. Each row for the heatmap displays the gene encoding for each
subunit in HGNC symbols, whereas each column displays an experiment. For each grid,
the more navy it is, the more negatively expressed the gene is. Vice versa for the
brightness of yellow representing positive expression
Usage
1
Arguments
complex
(char) name of the complex
Value
(list) A plot representing expression heatmap of the complex subunits
across all microarray experiments
Examples
1
2
3
4
5
6
7
## Not run:
complex <- "MDC1-MRN-ATM-FANCD2 complex"
heatmap <- complexExpHeatmap(complex) # give the expression profile heatmap
# for visualization
heatmap # display the heatmap
## End(Not run)
hyginn/BCB420.2019.ESA documentation built on May 29, 2019, 1:23 p.m.
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Description Usage Arguments Value Examples
Description
complexExpHeatmap Generate a Heatmap of complex subunits expression profile
for visualization. Each row for the heatmap displays the gene encoding for each
subunit in HGNC symbols, whereas each column displays an experiment. For each grid,
the more navy it is, the more negatively expressed the gene is. Vice versa for the
brightness of yellow representing positive expression
Usage
1 |
Arguments
complex |
(char) name of the complex |
Value
(list) A plot representing expression heatmap of the complex subunits across all microarray experiments
Examples
1 2 3 4 5 6 7 | ## Not run:
complex <- "MDC1-MRN-ATM-FANCD2 complex"
heatmap <- complexExpHeatmap(complex) # give the expression profile heatmap
# for visualization
heatmap # display the heatmap
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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