Description Usage Arguments Author(s)
visualizeInteractions
1 | visualizeInteractions(network, emap, ppi_ggi, gmap)
|
network |
(dataframe) 3-column dataframe of physically-interacting system components with their genetic interactions. The first two columns denote the interacting pair; the third is the type of genetic interaction. |
emap |
T(dataframe) An 11-by-3 dataframe mapping BioGrid GGI tag to its interpretation assuming that the system's components also interact physically. The first column contains the official BioGRID GGI tags; the second contains interpreted relationships under the assumption; the third contains notes on interpretation. |
ppi_ggi |
(dataframe) An optional 3-column dataframe to specify subset
of |
gmap |
(dataframe) An 11-by-2 dataframe mapping BioGrid GGI tag to its interpretation. The first column contains the official BioGRID GGI tags; the second contains interpreted relationships. |
Nada Elnour, nada.elnour@mail.utoronto.ca
A helper function of hypothesize
that plots the hypothesis graph
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