create_GRanges_class: Generates a GRanges object
In isglobal-brge/EpiMutations: Robust outlier identification for DNA methylation data
create_GRanges_class R Documentation
Generates a GRanges object
Description
This function makes a GRanges object
from a GenomicRatioSet.
Usage
create_GRanges_class(methy, cpg_ids)
Arguments
methy
a GenomicRatioSet object containing the control and
case samples used in epimutations or
epimutations_one_leave_out function.
cpg_ids
a character string specifying the name of the
CpGs in the DMR of interest.
Value
The function returns a GRanges object containing the
beta values and the genomic ranges of the CpGs of interest.
isglobal-brge/EpiMutations documentation built on April 20, 2024, 9:05 a.m.
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| create_GRanges_class | R Documentation |
Generates a GRanges object
Description
This function makes a GRanges object
from a GenomicRatioSet.
Usage
create_GRanges_class(methy, cpg_ids)
Arguments
methy |
a |
cpg_ids |
a character string specifying the name of the CpGs in the DMR of interest. |
Value
The function returns a GRanges object containing the beta values and the genomic ranges of the CpGs of interest.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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