res_manova: Creates a data frame containing the results obtained from...

View source: R/epi_manova.R

res_manovaR Documentation

Creates a data frame containing the results obtained from MANOVA

Description

Creates a data frame containing the genomic regions, statistics and direction for the DMRs.

Usage

res_manova(bump, sts)

Arguments

bump

a DMR obtained from bumphunter (i.e. a row from bumphunter method result).

sts

F statistic, Pillai and P value from epi_manova function results.

Value

The function returns a data frame containing the following information for each DMR:

  • genomic ranges

  • DMR base pairs

  • number and name of CpGs in DMR

  • statistics:

    • Outlier score

    • Outlier significance

    • Outlier direction

  • Sample name

For more information about the output see epimutations.


isglobal-brge/EpiMutations documentation built on Nov. 6, 2023, 2:03 a.m.