epi_iForest: Identifies epimutations using Isolation Forest

View source: R/epi_iForest.R

epi_iForestR Documentation

Identifies epimutations using Isolation Forest

Description

This function identifies regions with CpGs being outliers using isolation.forest approach.

Usage

epi_iForest(mixture, case_id, ntrees)

Arguments

mixture

beta values matrix. Samples in columns and CpGs in rows.

case_id

a character string specifying the name of the case sample.

ntrees

number of binary trees to build for the model. Default is 100.

Value

The function returns the outlier score for the given case sample.


isglobal-brge/EpiMutations documentation built on Nov. 6, 2023, 2:03 a.m.