epi_manova: Identifies epimutations using MANOVA

View source: R/epi_manova.R

epi_manovaR Documentation

Identifies epimutations using MANOVA

Description

This function identifies regions with CpGs being outliers using manova approach.

Usage

epi_manova(mixture, model, case_id)

Arguments

mixture

beta values matrix. Samples in columns and CpGs in rows.

model

design (or model) matrix.

case_id

a character string specifying the name of the case sample.

Value

The function returns the F statistic, Pillai and P value.


isglobal-brge/EpiMutations documentation built on April 20, 2024, 9:05 a.m.