epi_manova: Identifies epimutations using MANOVA
In isglobal-brge/EpiMutations: Robust outlier identification for DNA methylation data
epi_manova R Documentation
Identifies epimutations using MANOVA
Description
This function identifies
regions with CpGs being outliers
using manova approach.
Usage
epi_manova(mixture, model, case_id)
Arguments
mixture
beta values matrix.
Samples in columns and CpGs in rows.
model
design (or model) matrix.
case_id
a character string specifying
the name of the case sample.
Value
The function returns the F statistic, Pillai and P value.
isglobal-brge/EpiMutations documentation built on Nov. 6, 2023, 2:03 a.m.
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| epi_manova | R Documentation |
Identifies epimutations using MANOVA
Description
This function identifies regions with CpGs being outliers using manova approach.
Usage
epi_manova(mixture, model, case_id)
Arguments
mixture |
beta values matrix. Samples in columns and CpGs in rows. |
model |
design (or model) matrix. |
case_id |
a character string specifying the name of the case sample. |
Value
The function returns the F statistic, Pillai and P value.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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