get_ENSEMBL_data: Get ENSEMBL regulatory features overlapping a genomic region

In isglobal-brge/EpiMutations: Robust outlier identification for DNA methylation data

Get ENSEMBL regulatory features overlapping a genomic region

Description

This function queries for ENSEMBL regulatory features and collapse them to return a single record.

Usage

get_ENSEMBL_data(chromosome, start, end, mart)

Arguments

chromosome	Chromosome of the region
start	Start of the region
end	End of the region
mart	Mart object to perform the ENSEMBL query

Value

data.frame of one row with the ENSEMBL regulatory regions overlapping the genomic coordinate.

isglobal-brge/EpiMutations documentation built on April 20, 2024, 9:05 a.m.