annotate_bcv: Calculate and annotate biological coefficent of variation
In jacobheng/cellwrangler: Supplemental toolkit for single-cell RNAseq analysis
Description
Usage
Arguments
Value
Examples
Description
annotate_bcv() calculates the biological coefficent of variation from a give cds and returns an annotated
fData dataframe.
Usage
1
annotate_bcv(cds, scaled_matrix = NULL)
Arguments
cds
a monocle CellDataSet object
scaled_matrix
a scaled expression matrix derived from cds provided. Exprs(cds) should be divided by
the colsums and multiplied by 10,000.
Value
an annotated fData dataframe
Examples
1
annotate_bcv(dat)
jacobheng/cellwrangler documentation built on Aug. 12, 2019, 6:49 a.m.
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Description Usage Arguments Value Examples
Description
annotate_bcv() calculates the biological coefficent of variation from a give cds and returns an annotated fData dataframe.
Usage
1 | annotate_bcv(cds, scaled_matrix = NULL)
|
Arguments
cds |
a monocle CellDataSet object |
scaled_matrix |
a scaled expression matrix derived from cds provided. Exprs(cds) should be divided by the colsums and multiplied by 10,000. |
Value
an annotated fData dataframe
Examples
1 | annotate_bcv(dat)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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