get_kegg_database: Get kegg database for an organism
In jacobheng/cellwrangler: Supplemental toolkit for single-cell RNAseq analysis
Description
Usage
Arguments
Value
Examples
View source: R/get_kegg_database.R
Description
get_kegg_database() is a wrapper function around the keggList() function that retrieves
a kegg database for an organism and returns a dataframe
Usage
1
get_kegg_database(database, organism)
Arguments
database
a KEGG database; one of options available via KEGGREST listDatabases()
organism
KEGG organism code e.g. "mmu" for "Mus musculus"
Value
a dataframe
Examples
1
kegg_db <- get_kegg_database("pathway","mmu")
jacobheng/cellwrangler documentation built on Aug. 12, 2019, 6:49 a.m.
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Description Usage Arguments Value Examples
View source: R/get_kegg_database.R
Description
get_kegg_database() is a wrapper function around the keggList() function that retrieves a kegg database for an organism and returns a dataframe
Usage
1 | get_kegg_database(database, organism)
|
Arguments
database |
a KEGG database; one of options available via KEGGREST listDatabases() |
organism |
KEGG organism code e.g. "mmu" for "Mus musculus" |
Value
a dataframe
Examples
1 | kegg_db <- get_kegg_database("pathway","mmu")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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