plot_bcv: Plot biological coefficent of variation and annotate genes
In jacobheng/cellwrangler: Supplemental toolkit for single-cell RNAseq analysis
Description
Usage
Arguments
Examples
Description
plot_bcv() plots the mean - variance (bcv) relationship, as well as colors and annotates
genes of interest.
Usage
1
2
Arguments
annotated_fData
annotated fData object produced by the cellwrangler annotate_bcv() function.
genes_to_color
vector of Ensembl gene ids to color
color_scale
color scale used for coloring genes specified in genes_to_color.
genes_to_annotate
vector of Ensembl gene ids to annotate
Examples
1
plot_bcv(annotated_fData)
jacobheng/cellwrangler documentation built on Aug. 12, 2019, 6:49 a.m.
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Description Usage Arguments Examples
Description
plot_bcv() plots the mean - variance (bcv) relationship, as well as colors and annotates genes of interest.
Usage
1 2 |
Arguments
annotated_fData |
annotated fData object produced by the cellwrangler annotate_bcv() function. |
genes_to_color |
vector of Ensembl gene ids to color |
color_scale |
color scale used for coloring genes specified in genes_to_color. |
genes_to_annotate |
vector of Ensembl gene ids to annotate |
Examples
1 | plot_bcv(annotated_fData)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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