Description Usage Arguments Value Author(s)
Helper function to calculate the swarm initialization positions to provide as the swarmInit argument to CIMseqSwarm.
1 | swarmInit(singlets, k, null.weight = 1, seed = 9238232)
|
singlets |
CIMseqSinglets; A CIMseqSinglets object. |
k |
integer; Number of cells in each combination, i.e. 2 gives doublets, 3 gives triplets, etc. Must be >= 2. |
null.weight |
numeric; Weight to adjust the amount of noise in the initialization positions. Default = 1. |
seed |
integer; A seed to set. |
A matrix with the swarm initialization state.
Martin Enge
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