quantifyMultipleMotifs: Applies quantifyMotifDisruption to a list of motifs

Description Usage Arguments

Description

Converts the output into a data frame and performs some basic filtering

Usage

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quantifyMultipleMotifs(peak_id, snp_id, pwm_list, peak_metadata,
  peak_sequences, snp_metadata, window_size = 25,
  max_score_thresh = 0.7, rel_diff_thresh = 0)

Arguments

max_score_thresh

Maximal relative score across variants must be greater than this (default = 0.8)

rel_diff_thresh

Difference in relative binding score must be greater than this (default = 0)


kauralasoo/seqUtils documentation built on May 20, 2019, 7:42 a.m.