API for kevincjnixon/BinfTools
Useful functions for standard analyses

Global functions
.clusBar Source code
.clusHeatmap Source code
.corPlots Source code
.custPairs Source code
.data_sum Source code
.getOL Source code
.makeNames Source code
.nonOL Source code
.perMean Source code
.rowGeoMean Source code
.rowMedian Source code
.testNorm Source code
GOHeat Man page Source code
GOHeat2 Man page
GO_Dot Man page Source code
GO_GEM Man page Source code
GO_Table Man page Source code
GO_plot Man page Source code
GOgrep Man page Source code
GOtab Man page Source code
GSEA Man page Source code
GSEA_EM Man page Source code
GSEAclus Man page Source code
GenerateGSEA Man page Source code
MA_Plot Man page Source code
PathWC Man page Source code
avgExp Man page Source code
barGene Man page Source code
barplotTopGSEA Man page Source code
calcGaps Man page Source code
clusFigs Man page Source code
clusGO Man page Source code
clusRelev Man page Source code
colPal Man page Source code
combCounts Man page Source code
combGO_plot Man page Source code
corHeat Man page Source code
count_plot Man page Source code
customGMT Man page Source code
customGO Man page Source code
dPlot Man page Source code
enPlot Man page Source code
expCor Man page Source code
exploreData Man page Source code
filtGO Man page
filtOL Source code
fromEdgeR Man page Source code
fromLimma Man page Source code
geoMean Man page Source code
getSym Man page Source code
gmtHeat Man page Source code
gsea_gmt Man page Source code
gsva_plot Man page Source code
heatClus Man page Source code
heatClusRes Man page Source code
interMA Man page Source code
interVP Man page Source code
listGO_Table Man page Source code
loadData Man page Source code
loadFC Man page Source code
makeTermList Man page Source code
mgrep Man page Source code
na.rm Man page
normToGene Man page Source code
plotClusBox Man page
plotCor Man page Source code
plotTime Man page Source code
plotVenn Man page Source code
plotrnk Man page Source code
pseudoMA Man page Source code
quart_group Man page Source code
read.gmt Man page
readGMT Man page Source code
rmNA Man page Source code
showPals Man page Source code
subGSEA Man page Source code
subRes Man page Source code
vol3d Man page Source code
volcanoPlot Man page Source code
write.gmt Man page
writeGMT Man page Source code
zheat Man page Source code
zheat_v2 Man page
kevincjnixon/BinfTools documentation built on July 10, 2024, 11:46 a.m.