STRandOUT: A table like the one exported in the Strand .ah file

In kkeenan02/MsatAllele: Visualizes the scoring and binning of microsatellite fragment sizes

Description

A table like the one exported in the Strand .ah file

Usage

data(STRandOUT)

Format

A data frame with 1440 observations on the following 10 variables.

V1

A column with both sample code and number

V2

The sample number, not sure what this means in the sequencer structure

V3

A factor with the colors use for each marker

V4

A factor with sample names

V5

A factor with marker names

V6

fragment sizes for the first allele scored

V7

fragment sizes for the second allele scored, if any (i.e. homozygotes have nothing here)

V8

Rounded allele codes, using the weird Strand algorithm

V9

a logical vector

V10

a logical vector

Author(s)

Filipe Alberto

References

Alberto F. MsatAllele_1.0: an R package to visualize the binning of microsatellite alleles Journal of Heredity. 100(3):394,397

Examples

data(STRandOUT)
	transDB(STRandOUT,"25-2-2008","Plate1-MX4MX5")

kkeenan02/MsatAllele documentation built on May 20, 2019, 10:42 a.m.