getpoints: Interacts with AlleleCum graph to list observations

In kkeenan02/MsatAllele: Visualizes the scoring and binning of microsatellite fragment sizes

Description

This function interacts with the graph created by AlleleCum, the user needs to click on the y axis intersections (allele size) of that graph to define the minimum and maximum values of the range of observations to list.

Usage

getpoints(Database, marker)

Arguments

Database	A data base with loci and fragment size information
marker	The locus to be sorted

Details

The user need to call the graphical display of subdataBase first and then use getpoints. You need to click select first the minimum value for the range of fragment sizes to list, by clicking somewhere on the plot area intersecting that y axis value, and then reposition the mouse cursor to the maximum limit value to list.

Value

DFrow	The row.name information for that fragment in the data base
Sample	The Sample code
Reading	The fragment size
Gel	The Strand file for that fragment

Author(s)

Filipe Alberto

References

Alberto F. MsatAllele_1.0: an R package to visualize the binning of microsatellite alleles Journal of Heredity. 100(3):394,397

See Also

subdataBase, AlleleCum

Examples

data(DBase)
AlleleCum(DBase,"BC-3")
getpoints(DBase,"BC-3")

kkeenan02/MsatAllele documentation built on May 20, 2019, 10:42 a.m.