Description Usage Arguments Details Value Author(s) References See Also Examples
This function can be used to see the information for the fragments observed in a given the range of a particular loci. It is usefull to trace back samples with strange sizes to their original Strand files
1 | subdataBase(DataBase, marker, MIN=min(DataBase[,3]), MAX=max(DataBase[,3]))
|
DataBase |
A data base with loci and fragment size information |
marker |
The locus to be sorted |
MIN |
The lower limit of the restricted range |
MAX |
The upper limit of the restricted range |
Returns a list of observations from the data base for a given locus and range defined by the MIN and MAX allele sizes arguments, with default values equal to the minimum and maximum observations recorded in the data base
~Describe the value returned If it is a LIST, use
DFrow |
The row.name information for that fragment in the data base |
Sample |
The Sample code |
Reading |
The fragment size |
Gel |
The Strand file for that fragment |
Filipe Alberto
Alberto F. MsatAllele_1.0: an R package to visualize the binning of microsatellite alleles Journal of Heredity. 100(3):394,397
1 2 | data(DBase)
subdataBase(DBase,"BC-4",228,232)
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