Description Usage Arguments Value
Run DE analysis for each cluster of spots vs remaining spots
1 | RunDEspaceST(spST, clusters = "topic", verbose = TRUE, pvalue = 0.05)
|
spST |
spaceST object |
clusters |
Integer vector of cluster IDs or character specifying existing cluster vector ("topic", "SNN") |
verbose |
Print messages |
pvalue |
pvalue cutoff |
Topic matrix
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