Find most variable genes using calc_varstats function from trendsceek.
1 2 | var_genes(x, quantile.cutoff = 0.9, method = "glm",
min.ncells.expr = 3, min.expr = 5)
|
x |
spaceST object |
quantile.cutoff |
set cutoff level |
method |
method used for linear regression |
min.ncells.expr |
An integer specifying the minimum number of cells a gene needs to be expressed in with an expression level above 'min.expr'. |
min.expr |
A numeric specifying the minimum expression required in a cell. |
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