Description Usage Arguments Value
This function is used to merge datasets in a list of expression datasets. Genes which are not present in some datasets will get 0 values in those datasets. The merged dataset is subsequently filtered from features with few unique genes and genes with low expression counts.
1 2 | merge_exp_list(ls, mc.cores = NULL, unique.genes = 0, min.exp = 0,
min.features = 0, filter.genes = NULL, delimiter = "_")
|
ls |
List of expression data.frames, data.frame or matrix. |
unique.genes |
Integer value specifying number of unique genes allowed in a feature. |
min.exp |
Integer value specifying lowest expression value allowed in min.features number of features. |
min.features |
Integer value specifying number of features allowed with min.exp count. |
filter.genes |
Character vector specifying genes that should be filtered out. |
delimiter |
Delimiter used in header. |
Merged and filtered dataframe.
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