An S4 class object used to filter and store spatial transcriptomics data from multiple tissue sections
expr
Object of class dcGMatrix containing gene expression values.
norm.data
Object of class dcGMatrix containing normalized expression values.
lda.results
Object of class topics obtained using the compute.lda function from cellTree.
tsne
Matrix object representation of t-SNE results.
snn
Matrix object representation of the SNN graph.
coordinates
Data.frame representation of section ID and array coordinates.
filter.settings
List of filtering settings.
meta.data
List of meta data.
version
package version.
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