API for ludvigla/spaceST
spaceST

Global functions
BuildTopicSNN Man page Source code
CalcSNNSparse Man page Source code
CreatespaceSTobject Man page Source code
DE_heatmap Man page Source code
ExtractTopFeaturesST Man page Source code
NormalizespaceST Man page Man page
NormalizespaceST,spaceST-methods Man page
RunDEspaceST Man page Source code
RunModularityClusteringspaceST Man page Source code
RunTSNEspaceST Man page Source code
ST_statistics Man page Source code
ST_statistics_plot Man page Source code
SetIfNull Man page Source code
SpatialNetwork Man page Source code
batch.correct Man page Man page
batch.correct,spaceST-methods Man page
calc_cp10k Man page Source code
clusterST Man page Source code
cluster_matrix Man page Source code
cluster_matrix.default Source code
cluster_matrix.spaceST Source code
collect_gene_data Man page Source code
counts Man page Man page
counts,spaceST-methods Man page
dim Man page
dim,spaceST-methods Man page
ensembl2hgnc Man page Source code
ensembl2hgnc.default Man page Source code
ensembl2hgnc.list Man page Source code
ensembl2hgnc.spaceST Man page Source code
filter Man page Man page
filter,spaceST-methods Man page
getLDA Man page Man page
getLDA,spaceST-methods Man page
get_coordinates Man page Source code
get_coordinates.default Man page Source code
get_coordinates.dgCMatrix Man page Source code
get_coordinates.spaceST Man page Source code
merge_exp_list Man page Source code
normcounts Man page Man page
normcounts,spaceST-methods Man page
palette.select Man page Source code
plot.QC.spaceST,spaceST-methods Man page
plotPCA Man page
plotPCA,spaceST-method Man page
plot_QC_spaceST Man page Man page
scale2range Source code
show Man page
show,spaceST-methods Man page
smooth.viz Man page Source code
spPCA Man page Man page
spPCA,spaceST-methods Man page
spaceST Man page Man page
spaceST-class Man page
spaceST-methods Man page
spaceST-package Man page
spatial.clusters Man page Source code
spatial.heatmap Man page Source code
spots.under.tissue Man page Man page
spots.under.tissue,spaceST-methods Man page
tessViz Man page Source code
tesselation.plot Man page Source code
tiles2polygon Man page Source code
topic.clusters Man page Man page
topic.clusters,spaceST-methods Man page
topic_compute Man page Source code
topic_compute.default Source code
topic_compute.spaceST Source code
topic_heatmap Man page Source code
var.genes Man page Source code
volcano_plot_spaceST Man page Source code
ludvigla/spaceST documentation built on July 14, 2018, 2:34 a.m.