GO_match_summary: Computes mean and median values of jaccard GO match score...

In mariiabilous/SuperCellBM:

Description

Computes mean and median values of jaccard GO match score within N.top statistically significant top correlated gene pairs

Usage

GO_match_summary(
  GO_match_SC,
  GO_match_sc,
  N.top = 1000,
  pval.thresh = 0.05,
  go_domain = "all",
  seed = 12345,
  na_to_0 = TRUE
)

Arguments

GO_match_SC	list of GO_match_top_cor_genes of super-cells
GO_match_sc	list of GO_match_top_cor_genes of single cells
N.top	number of statistically significant top cor genes pais
pval.thresh	statistical significance
go_domain	GO domain to consider
na_to_0	whether NA GO match replace with 0

Value

data frame with mean and median values of jaccard GO match score within N.top statistically significant top correlated gene pairs

mariiabilous/SuperCellBM documentation built on Jan. 28, 2022, 7:45 p.m.