compute_DEA_GT_bool: Compute bool vector of cluster-specific DEG
In mariiabilous/SuperCellBM:
View source: R/compute_supercells_DEA.R
Description
Compute bool vector of cluster-specific DEG
Usage
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compute_DEA_GT_bool(
DEA.GT,
all.genes = NULL,
logFC.thresh = 1,
pval.thresh = 0.05
)
Arguments
DEA.GT
GT differentially expressed genes (DEA for GT annotation)
logFC.thresh
thereshold to consider DEG to be statistically significant
pval.thresh
thereshold to consider DEG to be statistically significant (keep the same as in compute_supercells_DEA and compute_singlecells_DEA)
mariiabilous/SuperCellBM documentation built on Jan. 28, 2022, 7:45 p.m.
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View source: R/compute_supercells_DEA.R
Description
Compute bool vector of cluster-specific DEG
Usage
1 2 3 4 5 6 | compute_DEA_GT_bool(
DEA.GT,
all.genes = NULL,
logFC.thresh = 1,
pval.thresh = 0.05
)
|
Arguments
DEA.GT |
GT differentially expressed genes (DEA for GT annotation) |
logFC.thresh |
thereshold to consider DEG to be statistically significant |
pval.thresh |
thereshold to consider DEG to be statistically significant (keep the same as in compute_supercells_DEA and compute_singlecells_DEA) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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