Core2D: Core2D

Description Usage Arguments Value Author(s) References Examples

View source: R/core.R

Description

Core visualization 2D

Usage

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Core2D(coreMat, title = "Common core", plot = TRUE, xlabel = "Abundance",
  ylabel = "Core size (number of taxa)")

Arguments

coreMat

core matrix

title

title

plot

plot the figure

xlabel

X axis label

ylabel

Y axis label

Value

Used for its side effects

Author(s)

Contact: Leo Lahti microbiome-admin@googlegroups.com

References

A Salonen et al. The adult intestinal core microbiota is determined by analysis depth and health status. Clinical Microbiology and Infection 18(S4):16 20, 2012.

To cite the microbiome R package, see citation('microbiome')

Examples

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data(peerj32)
  c2d <- Core2D(createCore(t(peerj32$microbes)))

microbiome/microbiomeold documentation built on May 22, 2019, 9:57 p.m.