retrieve.probesets: retrieve.probesets
In microbiome/microbiomeold: Tools for microbiome analysis
Description
Usage
Arguments
Value
Author(s)
References
Examples
Description
List probes for each probeset
Usage
1
retrieve.probesets(phylogeny.info, level = "species", name = NULL)
Arguments
phylogeny.info
data.frame with oligo - phylotype
mapping information
level
phylotype level for probesets
name
specify phylotypes to check (optional)
Value
A list. Probes for each phylotype.
Author(s)
Contact: Leo Lahti microbiome-admin@googlegroups.com
References
See citation('microbiome')
Examples
1
2
phylogeny.info <- GetPhylogeny('HITChip')
sets <- retrieve.probesets(phylogeny.info, 'species', 'Weissella confusa')
microbiome/microbiomeold documentation built on May 22, 2019, 9:57 p.m.
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Description Usage Arguments Value Author(s) References Examples
Description
List probes for each probeset
Usage
1 | retrieve.probesets(phylogeny.info, level = "species", name = NULL)
|
Arguments
phylogeny.info |
data.frame with oligo - phylotype mapping information |
level |
phylotype level for probesets |
name |
specify phylotypes to check (optional) |
Value
A list. Probes for each phylotype.
Author(s)
Contact: Leo Lahti microbiome-admin@googlegroups.com
References
See citation('microbiome')
Examples
1 2 | phylogeny.info <- GetPhylogeny('HITChip')
sets <- retrieve.probesets(phylogeny.info, 'species', 'Weissella confusa')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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