check.anova: Calculate ANOVA test (BH correction) for multi-group...

Description Usage Arguments Value Author(s) References Examples

View source: R/anova.R

Description

Calculate ANOVA test (BH correction) for multi-group comparison

Usage

1
check.anova(dat, group, p.adjust.method = "BH", sort = FALSE)

Arguments

dat

data matrix (features x samples; eg. HITChip taxa vs. samples)

group

Vector with specifying the groups

p.adjust.method

p-value correction method for p.adjust function (default 'BH'). If NULL, no correction will be performed.

sort

sort the results

Value

Corrected p-values for multi-group comparison.

Author(s)

Contact: Leo Lahti microbiome-admin@googlegroups.com

References

See citation('microbiome')

Examples

1
2
data(peerj32)
  pval <- check.anova(t(peerj32$microbes), peerj32$meta$time)

microbiome/microbiomeold documentation built on May 22, 2019, 9:57 p.m.