make_prev_df: Make a prevalance dataframe
In mworkentine/mattsUtils: Personal Utility Functions For Various Analysis
View source: R/prevalance_filtering.R
Description
Function that takes a phyloseq object and creates a dataframe indicating
the prevalance of each OTU
Usage
1
make_prev_df(physeq, prev_def)
Arguments
physeq
a valid phyloseq object
prev_def
prevalance definition, the minimum count for an OTU to defined
as present
mworkentine/mattsUtils documentation built on May 23, 2019, 11:58 a.m.
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View source: R/prevalance_filtering.R
Description
Function that takes a phyloseq object and creates a dataframe indicating the prevalance of each OTU
Usage
1 | make_prev_df(physeq, prev_def)
|
Arguments
physeq |
a valid phyloseq object |
prev_def |
prevalance definition, the minimum count for an OTU to defined as present |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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