getAnalyteFromPathway: Use fast search algorithm to find all pathways from given...

In ncats/RaMP-DB: RaMP (Relational Database of Metabolomic Pathways)

Description

Use fast search algorithm to find all pathways from given analytes

Usage

getAnalyteFromPathway(pathway, conpass = NULL, dbname = "ramp",
  username = "root", host = "localhost")

Arguments

pathway	a string or a vector of strings that contains pathways of interest
conpass	password for database access (string)
dbname	name of the mysql database (default is "ramp")
username	username for database access (default is "root")
host	host name for database access (default is "localhost")

Value

a data.frame that contains all search results

Examples

## Not run: 
con <- connectToRaMP(dbname="ramp",username="root",conpass="mypassword")
getAnalyteFromPathway <- pathway="sphingolipid metabolism",conpass="mypassword")

## End(Not run)

ncats/RaMP-DB documentation built on Nov. 21, 2020, 7:41 p.m.