API for ncats/RaMP-DB
RaMP (Relational Database of Metabolomic Pathways)

Global functions
FilterFishersResults Man page Source code
bhCorrect Man page Source code
buildFrequencyTables Man page Source code
buildPropertyList Source code
checkIdPrefixes Man page Source code
chemicalClassEnrichment Man page Source code
chemicalClassSurvey Man page Source code
chemicalClassSurveyRampIdsConn Man page Source code
chemicalClassSurveyRampIdsFullPopConn Man page Source code
cleanup Man page Source code
compute_overlap_matrix Man page Source code
compute_overlap_matrix2 Source code
connectToRaMP Man page Source code
findAnalyteHasPathway Man page Source code
findCluster Man page Source code
find_duplicate_pathways Man page Source code
getAnalyteFromPathway Man page Source code
getChemicalProperties Man page Source code
getCurrentRaMPSourceDBVersions Man page Source code
getCurrentRaMPVersion Man page Source code
getCustomPathwayFromAnalyte Source code
getEntityCountsFromSourceDBs Man page Source code
getMetaFromOnto Man page Source code
getMetabChemClass Man page Source code
getMetabClassDataSources Man page Source code
getMetabClassTypes Man page Source code
getOntoFromMeta Man page Source code
getOntologies Man page Source code
getPathwayFromAnalyte Man page Source code
getPathwayNameList Man page Source code
getPrefixesFromAnalytes Man page Source code
getRaMPAnalyteIntersections Man page Source code
getRaMPInfoFromAnalytes Man page Source code
getTotalFoundInCategories Man page Source code
pathwayResultsPlot Man page Source code
plotCataNetwork Man page Source code
processData Man page Source code
queryReport Man page Source code
rampFastCata Man page Source code
rampFastCataOriginal Man page Source code
rampFastPathFromSource Man page Source code
rampFindClassInfoFromSourceId Man page Source code
rampFindSourceFromId Man page Source code
rampFindSourceRampId Man page Source code
rampFindSynonymFromSynonym Man page Source code
runCombinedFisherTest Man page Source code
runFisherTest Man page Source code
segregateDataBySource Man page Source code
setConnectionToRaMP Man page Source code
updateOverlapMatrices Man page Source code
updateOverlapMatrix Man page Source code
writePathwaysToCSV Man page Source code
write_FishersResults Man page Source code
ncats/RaMP-DB documentation built on Sept. 26, 2022, 4:37 a.m.