plotAnalyteOverlapPerRxnLevel: Plots an interactive upset plot of overlapping input...

In ncats/RaMP-DB: RaMP (Relational Database of Metabolomic Pathways)

Plots an interactive upset plot of overlapping input compounds at reaction class level 1

Description

Plots an interactive upset plot of overlapping input compounds at reaction class level 1

Usage

plotAnalyteOverlapPerRxnLevel(
  reactionsResults = "",
  includeCofactorMets = FALSE
)

Arguments

reactionsResults	output of getReactionsForAnalytes()
includeCofactorMets	include metabolites labeled at cofactors within ChEBI (Default = FALSE)

Value

An interactive HTML upset plot that allows the user to visualize the overlap in the number of input compounds across level 1 of reaction classes.

ncats/RaMP-DB documentation built on April 28, 2024, 3:28 a.m.