plotCataNetwork: Plots a network based on gene-metabolite relationships

Description Usage Arguments Value Examples

View source: R/rampFastQueryTab4.R

Description

Plots a network based on gene-metabolite relationships

Usage

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plotCataNetwork(catalyzedf = NULL)

Arguments

catalyzedf

a data.frame output by rampFastCata() that contains analytes that are in the same reaction

Value

An interactive HTML plot that allows the user to pan/zoom into regions of interest. User genes/metabolites are highlighted in blue, whereas analytes found by the function are orange.

Examples

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## Not run: 
catalyzedf <- rampFastCata(analytes="creatine",conpass="mypassword",NamesOrIds="names")
plotCataNetwork(catalyzedf)

## End(Not run)

ncats/RaMP-DB documentation built on Nov. 21, 2020, 7:41 p.m.