View source: R/SourceDataFunctions.R
getRaMPAnalyteIntersections | R Documentation |
Retrieve RaMP Analyte Source Intersections, these indicate the level of analyte overlaps between our sources
getRaMPAnalyteIntersections(
analyteType = "metabolites",
format = "json",
scope = "mapped-to-pathway",
db = RaMP()
)
analyteType |
returns analyte overlaps for 'metabolites' or 'genes' |
format |
can be one of either 'json', 'upsetR_expression' |
scope |
value in c('global', 'mapped-to-pathway'), indicates all metabolite stats should be returned, or just those associated with pathways. |
db |
a RaMP database object |
current analyte overlaps counts between current data sources, for the specified analyteType
## Not run:
jsonResult <- getRaMPAnalyteIntersections(analyteType='genes', format='json')
## End(Not run)
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