| .onAttach |
Man page
Source code
|
| ASquantFileInput |
Man page
Source code
|
| HTMLfast |
Man page
Source code
|
| SraRunTableSampleInfoFormat |
Source code
|
| [.GEandAScorrelation |
Man page
|
| [.sticky |
Man page
|
| `[.GEandAScorrelation` |
Source code
|
| `[.sticky` |
Source code
|
| addFileAttrs |
Source code
|
| addObjectAttrs |
Man page
|
| addTCGAdata |
Man page
Source code
|
| analyseSingleEvent |
Source code
|
| analysesPlotSet |
Man page
Source code
|
| analysesServer |
Man page
Source code
|
| analysesTableSet |
Man page
Source code
|
| analysesUI |
Man page
Source code
|
| appServer |
Man page
Source code
|
| appUI |
Man page
Source code
|
| appendNewGroups |
Man page
Source code
|
| areSplicingEvents |
Man page
Source code
|
| articleUI |
Man page
Source code
|
| as.table.GEandAScorrelation |
Man page
|
| assignColours |
Man page
Source code
|
| assignValuePerPatient |
Man page
|
| assignValuePerSubject |
Man page
Source code
|
| basicStats |
Man page
Source code
|
| blendColours |
Man page
|
| browseDownloadFolderInput |
Man page
Source code
|
| browserHistory |
Man page
Source code
|
| bsPopoverMod |
Source code
|
| calcGroupStats |
Source code
|
| calculateAxisStats |
Source code
|
| calculateInclusionLevels |
Man page
Source code
|
| calculateLoadingsContribution |
Man page
Source code
|
| checkFileFormat |
Man page
Source code
|
| checkFirebrowse |
Man page
Source code
|
| checkGroupType |
Man page
Source code
|
| checkIntegrity |
Man page
Source code
|
| checkSurvivalInput |
Man page
|
| chooseFilesLinux |
Source code
|
| chooseFilesMac |
Source code
|
| closeProgress |
Man page
Source code
|
| clusterICAset |
Man page
Source code
|
| clusterSet |
Man page
Source code
|
| colSums,EList-method |
Man page
|
| collapseElemsToSingleString |
Source code
|
| colourInputMod |
Man page
Source code
|
| colsAsNumbers |
Source code
|
| combineSplicingEventInfo |
Source code
|
| contextUI |
Source code
|
| convertGeneIdentifiers |
Man page
Source code
|
| convertListOfLists2DataFrame |
Source code
|
| convertNumberCols2Numbers |
Source code
|
| correlateGEandAS |
Man page
Source code
|
| correlationServer |
Man page
Source code
|
| correlationUI |
Man page
Source code
|
| createDataTab |
Man page
Source code
|
| createDensitySparklines |
Man page
Source code
|
| createEventPlotting |
Man page
Source code
|
| createGroup |
Man page
Source code
|
| createGroupByAttribute |
Man page
Source code
|
| createGroupById |
Man page
Source code
|
| createGroupFromInput |
Man page
Source code
|
| createInfoAndClearButtons |
Source code
|
| createJunctionsTemplate |
Man page
Source code
|
| createOptimalSurvData |
Man page
Source code
|
| createSparklines |
Man page
Source code
|
| customColMedians |
Man page
Source code
|
| customRowMaxs |
Man page
Source code
|
| customRowMeans |
Man page
Source code
|
| customRowMedians |
Man page
Source code
|
| customRowMins |
Man page
Source code
|
| customRowRanges |
Man page
Source code
|
| customRowVars |
Man page
Source code
|
| dataServer |
Man page
Source code
|
| dataUI |
Man page
Source code
|
| diagramSplicingEvent |
Man page
Source code
|
| diffAnalyses |
Man page
Source code
|
| diffEventServer |
Man page
Source code
|
| diffEventUI |
Man page
Source code
|
| diffExpressionEventServer |
Man page
Source code
|
| diffExpressionEventUI |
Man page
Source code
|
| diffExpressionServer |
Man page
Source code
|
| diffExpressionSet |
Man page
Source code
|
| diffExpressionTableServer |
Man page
Source code
|
| diffExpressionTableUI |
Man page
Source code
|
| diffExpressionUI |
Man page
Source code
|
| diffSplicingEventServer |
Man page
Source code
|
| diffSplicingEventUI |
Man page
Source code
|
| diffSplicingServer |
Man page
Source code
|
| diffSplicingSet |
Man page
Source code
|
| diffSplicingTableServer |
Man page
Source code
|
| diffSplicingTableUI |
Man page
Source code
|
| diffSplicingUI |
Man page
Source code
|
| dimReductionServer |
Man page
Source code
|
| dimReductionUI |
Man page
Source code
|
| disableTab |
Man page
Source code
|
| discardElemsInList |
Source code
|
| discardLowCoveragePSIvalues |
Man page
Source code
|
| discardOutsideSamplesFromGroups |
Man page
Source code
|
| discardVastToolsByCvg |
Source code
|
| display |
Man page
Source code
|
| downloadFiles |
Man page
Source code
|
| downloadGtexFiles |
Source code
|
| downloadRecountData |
Source code
|
| drawCurve |
Source code
|
| drawPath |
Source code
|
| drawRect |
Source code
|
| drawText |
Source code
|
| enableTab |
Man page
Source code
|
| endProcess |
Man page
Source code
|
| ensemblToUniprot |
Man page
Source code
|
| errorAlert |
Man page
Source code
|
| errorDialog |
Man page
Source code
|
| errorModal |
Man page
Source code
|
| escape |
Man page
Source code
|
| eventPlotOptions |
Man page
Source code
|
| exportGroupsToFile |
Man page
Source code
|
| export_highcharts |
Man page
Source code
|
| fasterDataStats |
Source code
|
| fileBrowser |
Man page
Source code
|
| fileBrowserInfoInput |
Man page
Source code
|
| fileBrowserInput |
Man page
Source code
|
| fileBrowserShinyproxyInput |
Source code
|
| filterGeneExpr |
Man page
Source code
|
| filterGroups |
Man page
Source code
|
| filterPSI |
Man page
Source code
|
| findASeventsFromGene |
Man page
Source code
|
| findEventData |
Man page
Source code
|
| firebrowseGeneExpressionFormat |
Source code
|
| firebrowseJunctionReadsFormat |
Source code
|
| firebrowseMergeClinicalFormat |
Source code
|
| firebrowseNormalizedGeneExpressionFormat |
Source code
|
| firebrowseServer |
Man page
Source code
|
| firebrowseUI |
Man page
Source code
|
| fisher |
Man page
Source code
|
| fligner |
Man page
Source code
|
| geNormalisationFilteringInterface |
Man page
Source code
|
| geNormalisationFilteringServer |
Man page
Source code
|
| geNormalisationFilteringUI |
Man page
Source code
|
| geneExprFileInput |
Man page
Source code
|
| geneExprFilteringSetting |
Source code
|
| geneExprSurvSet |
Man page
Source code
|
| genericClinicalFormat |
Source code
|
| genericGeneExpressionFormat |
Source code
|
| genericInclusionLevelsFormat |
Source code
|
| genericJunctionReadsFormat |
Source code
|
| genericSampleInfoFormat |
Source code
|
| getASevent |
Man page
|
| getASevents |
Man page
|
| getActiveDataset |
Man page
|
| getAnnotationHub |
Man page
Source code
|
| getAnnotationName |
Man page
Source code
|
| getAssemblyVersion |
Man page
Source code
|
| getAttributesTime |
Man page
Source code
|
| getAutoNavigation |
Man page
|
| getCategories |
Man page
|
| getCategory |
Man page
|
| getCategoryData |
Man page
|
| getClinicalData |
Man page
Source code
|
| getClinicalDataForSurvival |
Man page
Source code
|
| getClinicalMatchFrom |
Man page
Source code
|
| getCognateGenesToFilter |
Source code
|
| getCoordPosByEventType |
Source code
|
| getCores |
Man page
|
| getCorrelation |
Man page
Source code
|
| getData |
Man page
|
| getDataRows |
Man page
Source code
|
| getDifferentialExpression |
Man page
Source code
|
| getDifferentialExpressionColumns |
Man page
Source code
|
| getDifferentialExpressionFiltered |
Man page
Source code
|
| getDifferentialExpressionResetPaging |
Man page
Source code
|
| getDifferentialExpressionSurvival |
Man page
Source code
|
| getDifferentialSplicing |
Man page
Source code
|
| getDifferentialSplicingColumns |
Man page
Source code
|
| getDifferentialSplicingFiltered |
Man page
Source code
|
| getDifferentialSplicingResetPaging |
Man page
Source code
|
| getDifferentialSplicingSurvival |
Man page
Source code
|
| getDownloadsFolder |
Man page
Source code
|
| getEvent |
Man page
|
| getFirebrowseCohorts |
Man page
|
| getFirebrowseDataTypes |
Man page
|
| getFirebrowseDateFormat |
Man page
Source code
|
| getFirebrowseDates |
Man page
|
| getGeneExpression |
Man page
Source code
|
| getGeneList |
Man page
Source code
|
| getGenes |
Man page
|
| getGenesFromSplicingEvents |
Man page
Source code
|
| getGlobal |
Man page
Source code
|
| getGroupIndependenceTesting |
Man page
Source code
|
| getGroups |
Man page
Source code
|
| getGtexDataTypes |
Man page
Source code
|
| getGtexDataURL |
Man page
Source code
|
| getGtexReleases |
Man page
Source code
|
| getGtexTissues |
Man page
Source code
|
| getHidden |
Man page
Source code
|
| getHighlightedPoints |
Man page
Source code
|
| getICA |
Man page
Source code
|
| getInclusionLevels |
Man page
|
| getInclusionLevelsSummaryStatsCache |
Man page
Source code
|
| getJunctionQuantification |
Man page
Source code
|
| getLabelledPoints |
Man page
Source code
|
| getMatchingSamples |
Man page
|
| getNumerics |
Man page
Source code
|
| getPCA |
Man page
Source code
|
| getPSIsummaryStats |
Source code
|
| getPatientFromSample |
Man page
|
| getPrecision |
Man page
Source code
|
| getSampleAttributes |
Man page
Source code
|
| getSampleFromPatient |
Man page
|
| getSampleFromSubject |
Man page
Source code
|
| getSampleId |
Man page
|
| getSampleInfo |
Man page
|
| getSelectedDataPanel |
Man page
Source code
|
| getSelectedGroups |
Man page
Source code
|
| getSelectedPoints |
Man page
Source code
|
| getServerFunctions |
Man page
Source code
|
| getSignificant |
Man page
Source code
|
| getSpecies |
Man page
Source code
|
| getSplicingEventCoordinates |
Man page
Source code
|
| getSplicingEventData |
Man page
Source code
|
| getSplicingEventFromGenes |
Man page
Source code
|
| getSplicingEventTypes |
Man page
Source code
|
| getSubjectAttributes |
Man page
Source code
|
| getSubjectFromSample |
Man page
Source code
|
| getSubjectId |
Man page
Source code
|
| getTCGAcohorts |
Man page
Source code
|
| getTCGAdataTypes |
Man page
Source code
|
| getTCGAdates |
Man page
Source code
|
| getURLtoDownload |
Man page
Source code
|
| getUiFunctions |
Man page
Source code
|
| getValidEvents |
Man page
Source code
|
| getValuePerPatient |
Man page
|
| getValuePerSubject |
Man page
|
| getZoom |
Man page
Source code
|
| ggplotAuxServer |
Man page
Source code
|
| ggplotServer |
Man page
Source code
|
| ggplotTooltip |
Man page
Source code
|
| ggplotUI |
Man page
Source code
|
| globalSelectize |
Man page
Source code
|
| groupByAttribute |
Man page
Source code
|
| groupByExpression |
Man page
Source code
|
| groupByGrep |
Man page
Source code
|
| groupById |
Man page
Source code
|
| groupByPreMadeList |
Man page
Source code
|
| groupManipulation |
Man page
Source code
|
| groupManipulationInput |
Man page
Source code
|
| groupPerElem |
Man page
Source code
|
| groupsServer |
Man page
Source code
|
| groupsServerOnce |
Man page
Source code
|
| groupsUI |
Man page
Source code
|
| gtexClinicalInfoFormat |
Source code
|
| gtexDataServer |
Man page
Source code
|
| gtexDataUI |
Man page
Source code
|
| gtexGeneReadsFormat |
Source code
|
| gtexJunctionReadsFormat |
Source code
|
| gtexSampleInfoFormat |
Source code
|
| gtexV7ClinicalInfoFormat |
Source code
|
| gtexV7JunctionReadsFormat |
Source code
|
| gtexV8JunctionReadsFormat |
Source code
|
| hc_addBasicStatsPlotLines |
Source code
|
| hc_addDensityPlot |
Source code
|
| hc_addRugLabels |
Source code
|
| hc_addRugPlot |
Source code
|
| hc_addViolinPlot |
Source code
|
| hc_autoHideYaxis |
Source code
|
| hc_scatter |
Man page
|
| hchart.survfit |
Man page
Source code
|
| helpServer |
Man page
Source code
|
| helpUI |
Man page
Source code
|
| icaServer |
Man page
Source code
|
| icaUI |
Man page
Source code
|
| importGroupsFrom |
Man page
Source code
|
| inclusionLevelsFilterInterface |
Man page
Source code
|
| inclusionLevelsFilterServer |
Man page
Source code
|
| inclusionLevelsFilterUI |
Man page
Source code
|
| inclusionLevelsInterface |
Man page
Source code
|
| inclusionLevelsServer |
Man page
Source code
|
| inclusionLevelsUI |
Man page
Source code
|
| infoModal |
Man page
Source code
|
| infoServer |
Man page
Source code
|
| infoUI |
Man page
Source code
|
| inheritAttrs |
Source code
|
| initialiseEventData |
Source code
|
| inlineDialog |
Man page
Source code
|
| insideFile |
Man page
Source code
|
| is.whole |
Man page
Source code
|
| isFile |
Man page
Source code
|
| isFirebrowseUp |
Man page
Source code
|
| isRStudioServer |
Man page
Source code
|
| joinEventsPerType |
Man page
Source code
|
| junctionQuantFileInput |
Man page
Source code
|
| junctionString |
Man page
Source code
|
| kruskal |
Man page
Source code
|
| labelBasedOnCutoff |
Man page
|
| levene |
Man page
Source code
|
| leveneTest |
Man page
Source code
|
| linkToArticles |
Man page
Source code
|
| linkToRunJS |
Man page
Source code
|
| listAllAnnotations |
Man page
Source code
|
| listPairs |
Source code
|
| listSplicingAnnotations |
Man page
Source code
|
| loadAnnotation |
Man page
Source code
|
| loadAnnotationHub |
Man page
Source code
|
| loadBy |
Man page
Source code
|
| loadCustomSplicingAnnotationSet |
Man page
Source code
|
| loadFile |
Man page
Source code
|
| loadFileFormats |
Man page
Source code
|
| loadFirebrowseData |
Man page
|
| loadFirebrowseFolders |
Man page
Source code
|
| loadGeneExpressionSet |
Man page
Source code
|
| loadGtexData |
Man page
Source code
|
| loadGtexDataShiny |
Man page
Source code
|
| loadGtexFile |
Man page
Source code
|
| loadLocalFiles |
Man page
Source code
|
| loadRecountGeneExpression |
Source code
|
| loadRecountJunctionQuant |
Source code
|
| loadRequiredData |
Man page
Source code
|
| loadSRAproject |
Man page
Source code
|
| loadSplicingQuantificationSet |
Man page
Source code
|
| loadTCGAdata |
Man page
Source code
|
| loadTCGAsampleMetadata |
Man page
Source code
|
| loadTestData |
Source code
|
| loadedDataModal |
Man page
Source code
|
| localDataServer |
Man page
Source code
|
| localDataUI |
Man page
Source code
|
| matchGroupASeventsAndGenes |
Man page
Source code
|
| matchGroupSubjectsAndSamples |
Man page
Source code
|
| matchSplicingEventsWithGenes |
Man page
Source code
|
| missingDataGuide |
Man page
Source code
|
| missingDataModal |
Man page
Source code
|
| modTabPanel |
Man page
Source code
|
| navSelectize |
Man page
Source code
|
| normaliseGeneExpression |
Man page
Source code
|
| normalizeGeneExpression |
Man page
|
| numericInputWithCheckbox |
Source code
|
| operateOnGroups |
Man page
Source code
|
| optimSurvDiffSet |
Man page
Source code
|
| optimalSurvivalCutoff |
Man page
Source code
|
| parseCategoricalGroups |
Man page
Source code
|
| parseDateResponse |
Man page
Source code
|
| parseEventData |
Source code
|
| parseEventFromStr |
Source code
|
| parseFile |
Man page
Source code
|
| parseFirebrowseMetadata |
Man page
Source code
|
| parseMatsA3SS |
Man page
Source code
|
| parseMatsA5SS |
Man page
Source code
|
| parseMatsAFE |
Man page
Source code
|
| parseMatsALE |
Man page
Source code
|
| parseMatsAnnotation |
Man page
Source code
|
| parseMatsEvent |
Man page
Source code
|
| parseMatsGeneric |
Man page
Source code
|
| parseMatsMXE |
Man page
Source code
|
| parseMatsRI |
Man page
Source code
|
| parseMatsSE |
Man page
Source code
|
| parseMisoA3SS |
Man page
Source code
|
| parseMisoA5SS |
Man page
Source code
|
| parseMisoAFE |
Man page
Source code
|
| parseMisoALE |
Man page
Source code
|
| parseMisoAnnotation |
Man page
Source code
|
| parseMisoEvent |
Man page
Source code
|
| parseMisoEventID |
Man page
Source code
|
| parseMisoGeneric |
Man page
Source code
|
| parseMisoId |
Man page
Source code
|
| parseMisoMXE |
Man page
Source code
|
| parseMisoRI |
Man page
Source code
|
| parseMisoSE |
Man page
Source code
|
| parseMisoTandemUTR |
Man page
Source code
|
| parseSampleGroups |
Man page
|
| parseSpeciesAssembly |
Source code
|
| parseSplicingEvent |
Man page
Source code
|
| parseSuppaA3SS |
Man page
|
| parseSuppaA5SS |
Man page
|
| parseSuppaAFE |
Man page
|
| parseSuppaALE |
Man page
|
| parseSuppaAnnotation |
Man page
Source code
|
| parseSuppaEvent |
Man page
Source code
|
| parseSuppaGeneric |
Man page
Source code
|
| parseSuppaMXE |
Man page
|
| parseSuppaRI |
Man page
|
| parseSuppaSE |
Man page
|
| parseTCGAsampleInfo |
Man page
Source code
|
| parseTCGAsampleTypes |
Man page
Source code
|
| parseTcgaSampleInfo |
Man page
|
| parseUniprotXML |
Man page
Source code
|
| parseUrlsFromFirebrowseResponse |
Man page
Source code
|
| parseVastToolsA3SS |
Man page
|
| parseVastToolsA5SS |
Man page
|
| parseVastToolsAnnotation |
Man page
Source code
|
| parseVastToolsEvent |
Man page
Source code
|
| parseVastToolsRI |
Man page
|
| parseVastToolsSE |
Man page
|
| pcaServer |
Man page
Source code
|
| pcaUI |
Man page
Source code
|
| performICA |
Man page
Source code
|
| performPCA |
Man page
Source code
|
| performSimpleDiffExpr |
Source code
|
| plot.GEandAScorrelation |
Man page
Source code
|
| plotASeventRegion |
Source code
|
| plotBand |
Source code
|
| plotClusters |
Man page
Source code
|
| plotCorrelation |
Man page
|
| plotDistribution |
Man page
Source code
|
| plotGeneExprPerSample |
Man page
Source code
|
| plotGroupIndependence |
Man page
Source code
|
| plotICA |
Man page
Source code
|
| plotLibrarySize |
Man page
Source code
|
| plotPCA |
Man page
Source code
|
| plotPCAvariance |
Man page
Source code
|
| plotPointsStyle |
Man page
Source code
|
| plotProtein |
Man page
Source code
|
| plotRowStats |
Man page
Source code
|
| plotRowStatsShiny |
Source code
|
| plotSingleICA |
Man page
Source code
|
| plotSplicingEvent |
Man page
Source code
|
| plotSplicingEventHelper |
Source code
|
| plotSurvivalCurves |
Man page
Source code
|
| plotSurvivalPvaluesByCutoff |
Man page
Source code
|
| plotTranscripts |
Man page
Source code
|
| plotVariance |
Man page
|
| plottableXranges |
Man page
Source code
|
| prepareAnnotationFromEvents |
Man page
Source code
|
| prepareBoxPlotData |
Source code
|
| prepareDatatablePlots |
Source code
|
| prepareDatatableSettingsTable |
Source code
|
| prepareDiffExprStats |
Source code
|
| prepareEventInfoTooltip |
Source code
|
| prepareEventPlotOptions |
Man page
Source code
|
| prepareExternalLinks |
Source code
|
| prepareFileBrowser |
Man page
Source code
|
| prepareFirebrowseArchives |
Man page
Source code
|
| prepareGenePresentation |
Man page
Source code
|
| prepareGeneQuant |
Man page
Source code
|
| prepareGeneQuantSTAR |
Man page
Source code
|
| prepareJunctionQuant |
Man page
Source code
|
| prepareJunctionQuantSTAR |
Man page
Source code
|
| preparePreMadeGroupForSelection |
Man page
Source code
|
| prepareSRAmetadata |
Man page
Source code
|
| prepareSVG |
Source code
|
| prepareWordBreak |
Man page
Source code
|
| preserveAttributes |
Man page
Source code
|
| prettifyEventID |
Source code
|
| prettifyEventType |
Source code
|
| print.GEandAScorrelation |
Man page
Source code
|
| print.geneList |
Source code
|
| print.splicingEventPlot |
Source code
|
| print.splicingEventPlotList |
Source code
|
| processButton |
Man page
Source code
|
| processClickRedirection |
Man page
Source code
|
| processCol |
Source code
|
| processDatasetNames |
Man page
Source code
|
| processEventDataByType |
Source code
|
| processSRAdata |
Man page
Source code
|
| processSurvData |
Man page
Source code
|
| processSurvTerms |
Man page
Source code
|
| processSurvival |
Man page
Source code
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| processVastToolsPSItable |
Source code
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| psiFastCalc |
Source code
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| psiFastCalc2 |
Source code
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| psiFilteringSet |
Source code
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| psiFilteringSetting |
Source code
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| psichomics |
Man page
Source code
|
| psichomicsGeneExpressionFormat |
Source code
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| psichomicsInclusionLevelsFormat |
Source code
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| pubmedUI |
Man page
Source code
|
| quantifySplicing |
Man page
Source code
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| quantifySplicingSet |
Man page
Source code
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| queryEnsembl |
Man page
Source code
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| queryEnsemblByEvent |
Man page
Source code
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| queryEnsemblByGene |
Man page
Source code
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| queryFirebrowseData |
Man page
Source code
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| queryPubMed |
Man page
Source code
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| queryUniprot |
Man page
Source code
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| readAnnot |
Man page
Source code
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| readFile |
Man page
Source code
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| recountDataServer |
Man page
Source code
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| recountDataUI |
Man page
Source code
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| recountSampleFormat |
Source code
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| reduceDimensionality |
Man page
Source code
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| removeAlert |
Man page
Source code
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| removeRedundantDatasets |
Source code
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| renameDuplicated |
Man page
Source code
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| renameGroups |
Man page
Source code
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| renderBoxplot |
Man page
Source code
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| renderDataTableSparklines |
Man page
Source code
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| renderEventDiagram |
Source code
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| renderGeneticInfo |
Man page
Source code
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| renderGroupInterface |
Man page
Source code
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| renderProteinInfo |
Man page
Source code
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| replaceStrInList |
Man page
Source code
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| rm.null |
Man page
Source code
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| roundDigits |
Man page
Source code
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| roundMaxUp |
Man page
Source code
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| roundMinDown |
Man page
Source code
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| sampleInfoFileInput |
Man page
Source code
|
| saveProcessedSRAdata |
Man page
Source code
|
| selectGroupsServer |
Man page
Source code
|
| selectGroupsUI |
Man page
|
| selectPreMadeGroup |
Man page
Source code
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| selectizeGeneInput |
Man page
Source code
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| setASevent |
Man page
Source code
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| setActiveDataset |
Man page
Source code
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| setAnnotationHub |
Man page
Source code
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| setAnnotationName |
Man page
Source code
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| setAssemblyVersion |
Man page
Source code
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| setAutoNavigation |
Man page
Source code
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| setCategory |
Man page
Source code
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| setClinicalMatchFrom |
Man page
Source code
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| setCores |
Man page
Source code
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| setCorrelation |
Man page
Source code
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| setData |
Man page
Source code
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| setDataTable |
Man page
Source code
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| setDifferentialExpression |
Man page
Source code
|
| setDifferentialExpressionColumns |
Man page
Source code
|
| setDifferentialExpressionFiltered |
Man page
Source code
|
| setDifferentialExpressionResetPaging |
Man page
Source code
|
| setDifferentialExpressionSurvival |
Man page
Source code
|
| setDifferentialSplicing |
Man page
Source code
|
| setDifferentialSplicingColumns |
Man page
Source code
|
| setDifferentialSplicingFiltered |
Man page
Source code
|
| setDifferentialSplicingResetPaging |
Man page
Source code
|
| setDifferentialSplicingSurvival |
Man page
Source code
|
| setEvent |
Man page
|
| setFirebrowseData |
Man page
Source code
|
| setGlobal |
Man page
Source code
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| setGroupIndependenceTesting |
Man page
Source code
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| setGroups |
Man page
Source code
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| setHidden |
Man page
Source code
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| setHighlightedPoints |
Man page
Source code
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| setICA |
Man page
Source code
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| setInclusionLevels |
Man page
Source code
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| setInclusionLevelsSummaryStatsCache |
Man page
Source code
|
| setLabelledPoints |
Man page
Source code
|
| setLocalData |
Man page
Source code
|
| setMultipleFilesData |
Man page
Source code
|
| setNormalisedGeneExpression |
Man page
Source code
|
| setOperation |
Man page
Source code
|
| setOperationIcon |
Man page
|
| setPCA |
Man page
Source code
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| setPrecision |
Man page
Source code
|
| setSampleInfo |
Man page
Source code
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| setSelectedDataPanel |
Man page
Source code
|
| setSelectedPoints |
Man page
Source code
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| setSignificant |
Man page
Source code
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| setSpecies |
Man page
Source code
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| setURLtoDownload |
Man page
Source code
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| setZoom |
Man page
Source code
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| showAlert |
Man page
Source code
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| showExtraInfo |
Source code
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| showGroupsTable |
Man page
Source code
|
| sidebar |
Man page
Source code
|
| signifDigits |
Man page
Source code
|
| singleDiffAnalyses |
Man page
Source code
|
| sortCoordinates |
Man page
Source code
|
| spearman |
Man page
Source code
|
| startProcess |
Man page
Source code
|
| startProgress |
Man page
Source code
|
| styleModal |
Man page
Source code
|
| subjectInfoFileInput |
Man page
Source code
|
| subjectMultiMatchWarning |
Man page
Source code
|
| subsetGeneExpressionFromMatchingGenes |
Man page
Source code
|
| successAlert |
Man page
Source code
|
| survdiffTerms |
Man page
Source code
|
| survfit.survTerms |
Man page
Source code
|
| survivalServer |
Man page
Source code
|
| survivalUI |
Man page
Source code
|
| t.sticky |
Man page
Source code
|
| tabDataset |
Man page
Source code
|
| table2html |
Man page
Source code
|
| tableRow |
Man page
|
| templateServer |
Man page
Source code
|
| templateUI |
Man page
Source code
|
| testGroupIndependence |
Man page
Source code
|
| testSingleIndependence |
Man page
Source code
|
| testSurvival |
Man page
|
| testSurvivalCutoff |
Man page
Source code
|
| textSuggestions |
Man page
Source code
|
| toJSarray |
Man page
Source code
|
| toggleRugBasedOnDataLength |
Source code
|
| traceInList |
Man page
Source code
|
| transformData |
Man page
Source code
|
| transformOptions |
Man page
Source code
|
| transformValues |
Man page
Source code
|
| trimWhitespace |
Man page
Source code
|
| ttest |
Man page
Source code
|
| uniqueBy |
Man page
Source code
|
| updateClinicalParams |
Man page
Source code
|
| updateFileBrowserInput |
Man page
Source code
|
| updateProgress |
Man page
Source code
|
| vasttoolsGeneExpressionFormat |
Source code
|
| vasttoolsInclusionLevelsFormat |
Source code
|
| vasttoolsInclusionLevelsTidyFormat |
Source code
|
| vennEvents |
Man page
Source code
|
| warningAlert |
Man page
Source code
|
| warningDialog |
Man page
Source code
|
| warningModal |
Man page
Source code
|
| wilcox |
Man page
Source code
|
| writeLengthWithinRect |
Source code
|
