differentialtable: The server function of the differentialtable module

In pinin4fjords/shinyngs: Shiny apps for NGS data

The server function of the differentialtable module

Description

This module provides information on the comparison betwen pairs of groups defined in a 'contrasts' slot of a ExploratorySummarizedExperimentList

Usage

differentialtable(input, output, session, eselist)

Arguments

input	Input object
output	Output object
session	Session object
eselist	ExploratorySummarizedExperimentList object containing ExploratorySummarizedExperiment objects

Details

This function is not called directly, but rather via callModule() (see example).

Essentially this funnction uses the contrasts module to group samples and calculate fold changes, adding test statistics where available.

Examples

callModule(differentialtable, "differentialtable", eselist)

pinin4fjords/shinyngs documentation built on Feb. 28, 2024, 10:19 a.m.