read_differential: Read tables of differential statistics

In pinin4fjords/shinyngs: Shiny apps for NGS data

Read tables of differential statistics

Description

Read tables of differential statistics

Usage

read_differential(
  filename,
  feature_id_column = NULL,
  pval_column = NULL,
  qval_column = NULL,
  fc_column = NULL,
  unlog_foldchanges = FALSE
)

Arguments

filename	File name of file with table of differential statistics
feature_id_column	Column of stats file with feature identifiers
pval_column	Column of stats file with p values
qval_column	Column of stats file with adjust p values/ q values
fc_column	Column of stats with fold changes
unlog_foldchanges	Reverse a log on fold changes? Set to TRUE if values are logged.

Value

output Validated selected columns of differential stats files as a data frame

pinin4fjords/shinyngs documentation built on Jan. 18, 2025, 7:09 p.m.