validate_indices: Validate assay indices based on a given string.

In pinin4fjords/shinyngs: Shiny apps for NGS data

Validate assay indices based on a given string.

Description

This function checks if the provided index string represents valid assays in the given assay data. The function can handle index strings that are comma-separated integers or assay names.

Usage

validate_indices(assay_data, index_string, prettify_names = TRUE)

Arguments

assay_data	A list containing matrices as assay data.
index_string	A string that can be a comma-separated list of integers or assay names.
prettify_names	Boolean. Prettify element names?

Value

A vector of valid indices (either as integers or assay names).

Examples

assay_data_example <- list(a = matrix(1:9, ncol=3), b = matrix(1:12, ncol=3), c = matrix(1:6, ncol=2))
valid_assays1 <- validate_indices(assay_data_example, "1,2")
valid_assays2 <- validate_indices(assay_data_example, "a,b")

pinin4fjords/shinyngs documentation built on Jan. 18, 2025, 7:09 p.m.