volcanoplotInput: The UI input function of the 'volcanoplot' module

In pinin4fjords/shinyngs: Shiny apps for NGS data

The UI input function of the volcanoplot module

Description

A volcano plot displays -log(10) of a p value/ FDR against a log(2) fold change on the x axis. This module produces such a plot using the scatterplot module (which uses plot_ly)), using data provided by the contrasts module based on the setting of contrasts in eselist.

Usage

volcanoplotInput(id, eselist)

Arguments

id	Submodule namespace
eselist	ExploratorySummarizedExperimentList object containing ExploratorySummarizedExperiment objects

Value

output An HTML tag object that can be rendered as HTML using as.character()

Examples

volcanoplotInput("myid", eselist)

# However, almost certainly called via application creation:

data(zhangneurons)
app <- prepareApp("volcanoplot", zhangneurons)
shinyApp(ui = app$ui, server = app$server)

pinin4fjords/shinyngs documentation built on Feb. 28, 2024, 10:19 a.m.