pmartR/pmartRseq: Analysis and Visualization of 16S Data

Provides analysis pipeline tools for processing 16S data. Integrates many different packages to easily support functionality including: normalization, filtering, indicator species, outlier selection, beta diversity, differential abundance, network analysis, and community metrics. Acts as the back end support for a Meatagenomics Exploratory Analysis Dashboard (mead).

install.packages("remotes")
remotes::install_github("pmartR/pmartRseq")