pmartR/pmartRseq: Analysis and Visualization of 16S Data

Provides analysis pipeline tools for processing 16S data. Integrates many different packages to easily support functionality including: normalization, filtering, indicator species, outlier selection, beta diversity, differential abundance, network analysis, and community metrics. Acts as the back end support for a Meatagenomics Exploratory Analysis Dashboard (mead).

Getting started

Package details

LicenseMIT + file LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
pmartR/pmartRseq documentation built on May 25, 2019, 9:20 a.m.