metadata_based_filter: Metadata filter object
In pmartR/pmartRseq: Analysis and Visualization of 16S Data
Description
Usage
Arguments
Value
Author(s)
Description
This function returns a metaFilter object, performing all of the
calculations needed to filter the data based off a specified
e_meta level
Usage
1
metadata_based_filter(omicsData, criteria)
Arguments
omicsData
An object of the classes "seqData"
criteria
Specify which omicsData$e_meta column name to filter on
Value
An object of class metaFilter (also a data.frame) that contains the
sample identifier, the values in the criteria column, and the corresponding
sum abundances.
Author(s)
Allison Thompson and Sarah Reehl
pmartR/pmartRseq documentation built on May 25, 2019, 9:20 a.m.
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Description Usage Arguments Value Author(s)
Description
This function returns a metaFilter object, performing all of the calculations needed to filter the data based off a specified e_meta level
Usage
1 | metadata_based_filter(omicsData, criteria)
|
Arguments
omicsData |
An object of the classes "seqData" |
criteria |
Specify which omicsData$e_meta column name to filter on |
Value
An object of class metaFilter (also a data.frame) that contains the sample identifier, the values in the criteria column, and the corresponding sum abundances.
Author(s)
Allison Thompson and Sarah Reehl
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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