feature_plot: Feature plot

In quadbiolab/VoxHunt: Projecting single-cell transcriptomes to spatial brain maps

Feature plot

Description

Feature plot

Usage

feature_plot(
  expr_mat,
  meta,
  markers,
  plot = xy_plot,
  sort = TRUE,
  scale = TRUE,
  ...
)

Arguments

expr_mat	A sample x gene expression matrix.
meta	Metadata with embedding coordinates.
markers	A character vector with genes to display.
plot	Function to use for generating individual plots.
sort	Logical. Whether to sort highest expressing cells up.
scale	Logical. Whether to scale the expression values.
...	Other arguments passed to patchwork::wrap_plots().

Value

A panel of feature plots for each gene.

quadbiolab/VoxHunt documentation built on March 4, 2024, 6:37 a.m.