summarize_structures: Summarize data over structures

In quadbiolab/VoxHunt: Projecting single-cell transcriptomes to spatial brain maps

Summarize data over structures

Description

Summarize data over structures

Usage

## S3 method for class 'BrainSpanMap'
summarize_structures(
  object,
  annotation_level = c("structure_group", "structure_name", "structure_acronym"),
  fun = colMeans
)

summarize_structures(object, ...)

## S3 method for class 'MousebrainMap'
summarize_structures(
  object,
  annotation_level = c("region", "class"),
  fun = colMeans
)

## S3 method for class 'VoxelMap'
summarize_structures(object, annotation_level = "custom_3", fun = colMeans)

Arguments

annotation_level	The structure annotation level to summarize voxels to.
fun	Function to use for summarizing voxels.

Value

A tibble with structure summaries

A tibble with structure summaries

A tibble with structure summaries

quadbiolab/VoxHunt documentation built on March 4, 2024, 6:37 a.m.