summarize_groups: Summarize data over groups
In quadbiolab/VoxHunt: Projecting single-cell transcriptomes to spatial brain maps

summarize_groups.BrainSpanMap

R Documentation

Summarize data over groups

Description

Summarize data over groups

Usage

## S3 method for class 'BrainSpanMap'
summarize_groups(object, groups = NULL, fun = colMeans)

summarize_groups(object, ...)

## S3 method for class 'MousebrainMap'
summarize_groups(object, groups = NULL, fun = colMeans)

## S3 method for class 'ReferenceMap'
summarize_groups(object, summarize = "query", groups = NULL, fun = colMeans)

## S3 method for class 'VoxelMap'
summarize_groups(object, groups = NULL, fun = colMeans)

Arguments

`groups`	A metadata column or character vector to group the cells, e.g. clusters, cell types.
`fun`	Function used to aggregate the groups.
`summarize`	A character vector indicating whether to summarize the query (''query'‘) or the reference ('’reference'') cells.