adjust: Adjusting of combine p-values using null model

In reggenlab/UniPath: UniPath provides robust statistical methods to represent every single cell using pathway and gene-set enrichment scores. It can be used with both single cell RNA-seq and single cell ATAC-seq profile with scalability for atlas scale data-sets. Unipath comes with several features like psuedo-temporal ordering using pathway scores and unconventional way of enumerating differences between two cell populations.

Description

Adjusting of combine p-values using null model

Usage

adjust(combp, combp_ref)

Arguments

combp	combined p-value matrix obtaing using gene expression matrix
combp_ref	combined p-value matrix obtaing using null model

Value

A list of three dataframes, One is adjusted p-value datafrmae, second is raw p-value data frame and third is log tranformed p-value data frame

Examples

adjust()

reggenlab/UniPath documentation built on Nov. 26, 2020, 8:09 a.m.