minimum_spanning_tree: Finding minimum spanning tree using shrinked distance matrix

In reggenlab/UniPath: UniPath provides robust statistical methods to represent every single cell using pathway and gene-set enrichment scores. It can be used with both single cell RNA-seq and single cell ATAC-seq profile with scalability for atlas scale data-sets. Unipath comes with several features like psuedo-temporal ordering using pathway scores and unconventional way of enumerating differences between two cell populations.

Description

Finding minimum spanning tree using shrinked distance matrix

Usage

minimum_spanning_tree(distance)

Arguments

distance

shrinked distance matrix

Value

Minimum spanning tree

Examples

minimum_spanning_tree()

reggenlab/UniPath documentation built on Nov. 26, 2020, 8:09 a.m.