dist_clust: Hierarchal clustering of pathway score matrix

In reggenlab/UniPath: UniPath provides robust statistical methods to represent every single cell using pathway and gene-set enrichment scores. It can be used with both single cell RNA-seq and single cell ATAC-seq profile with scalability for atlas scale data-sets. Unipath comes with several features like psuedo-temporal ordering using pathway scores and unconventional way of enumerating differences between two cell populations.

Description

Hierarchal clustering of pathway score matrix

Usage

dist_clust(pathwayscores, n)

Arguments

pathwayscores	Raw adjusted p-value matrix
n	Number of clusters required for pseudo temporal ordering

Value

Distance matrix and Clusters

Examples

dist_clust()

reggenlab/UniPath documentation built on Nov. 26, 2020, 8:09 a.m.